Software Nodo Catalunya-BIO
Name: CompARE
Autores: Guadalupe Gómez Melis, Marta Bofill Roig, Jordi Cortés Martínez i Moisés Gómez Mateu
Descripción: CompARE is a free online platform to help investigators to design randomized clinical trials with composite endpoint. Following features are available:
- Choose the primary endpoint
- Evaluate the gain in efficiency of using a primary composite endpoint either in the context of time-to-event or binary outcome.
- Obtain the sample size for a composite endpoint based on the information on its components and the correlation between them.
- Obtain the sample size of an study using a single endpoint.
- Get helpful numerical and intuitive graphical results.
Página web: https://cinna.upc.edu/compare
Nombre: FHtest
Autores: Ramon Oller, Klaus Langohr
Descripción: FHtest offers several tests for the comparison of two or more survival curves:
a) The Fleming-Harrington test for right-censored data based on permutations and on counting processes.
b) Extension of the Fleming-Harrington test for interval-censored data based on a permutation distribution and on a score vector distribution.
The article related with this package can be find here.
Página web: http://cran.r-project.org/web/packages/FHtest/index.html
Nombre: mbmdr
Autores: Víctor Urrea, M.Luz Calle, Kristel van Steen, Núria Malats
Descripción: Model Based Multifactor Dimension Reduction proposed by Calle et al. (2008) as a dimension reduction method for exploring gene-gene interactions.
Página web: http://cran.r-project.org/web/packages/mbmdr/index.html
Nombre: AUCFR
Autores: Víctor Urrea, M.Luz Calle
Descripción: Variable selection using Random Forest based on optimizing the area-under-the ROC curve (AUC) of the Random Forest.
Página web: http://cran.r-project.org/web/packages/AUCRF/index.html
Nombre: bwsurvival
Autores: Carles Serrat, Guadalupe Gómez, Victoria Moneta
Descripción: This R package implements the conditional survival function described in ‘Nonparametric bivariate estimation for successive survival times’ (C. Serrat and G. Gómez, 2007).
Página web: http://cran.r-project.org/web/packages/bwsurvival/index.html
Nombre: ICGE
Autores: Itziar Irigoien, Basilio Sierra, Concepción Arenas
Descripción: This R package implements the method for detecting relevant clusters and atypical units in gene expression described in ‘ICGE: an R package for detecting relevant clusters and atypical units in gene expression ’ (I. Irigoien, B. Sierra and C. Arenas, 2012).
Página web: https://cran.r-project.org/web/packages/ICGE/index.html
Nombre: WeDiBaDis
Autores: Itziar Irigoien, Francisco Mestres, Concepción Arenas
Descripción: This R package implements the weighted distance based discriminant analysis described in ‘ Weighted distance based discriminant analysis: the R package WeDiBaDis ’ (I. Irigoien, F. Mestres and C. Arenas, 2016).
Página web: https://github.com/ItziarI/WeDiBaDis
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